Analysis of genes having pattern m_other_intracellular-transport_activities_orfnum2SD_n9 in their upstream region

There is about 129 genes out of 6312 (2.04 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

sin3
346
18
2.546
0.05432
0.02671
515
20
1.9
0.03945
0.5753

yor051c (**14)
117
10
4.182
0.06351
0.01026
170
14
4.03
0.0732
0.0007614

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
sin3	346	18	2.546	0.05432	0.02671	515	20	1.9	0.03945	0.5753
yor051c (**14)	117	10	4.182	0.06351	0.01026	170	14	4.03	0.0732	0.0007614