Analysis of genes having pattern m_other_cation_transporters_orfnum2SD_n3 in their upstream region

There is about 172 genes out of 6312 (2.72 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

mac1
64
7
4.014
0.05146
0.132
82
10
4.475
0.06718
0.005985

rts1
144
13
3.313
0.05974
0.01517
213
15
2.584
0.05028
0.08512

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
mac1	64	7	4.014	0.05146	0.132	82	10	4.475	0.06718	0.005985
rts1	144	13	3.313	0.05974	0.01517	213	15	2.584	0.05028	0.08512