Analysis of genes having pattern m_metabolism_of_energy_reserves_orfnum2SD_n27 in their upstream region

There is about 198 genes out of 6312 (3.14 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

sbp1
31
6
6.17
0.0657
0.02078
58
9
4.947
0.06886
0.005884

sir4
126
13
3.289
0.05948
0.01698
189
17
2.867
0.05987
0.01097

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
sbp1	31	6	6.17	0.0657	0.02078	58	9	4.947	0.06886	0.005884
sir4	126	13	3.289	0.05948	0.01698	189	17	2.867	0.05987	0.01097