Analysis of genes having pattern m_drug_transporters_orfnum2SD_n9 in their upstream region

There is about 191 genes out of 6312 (3.03 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

gcn4
72
8
3.672
0.0512
0.1232
92
10
3.592
0.05625
0.04229

pet127
4
4
33.05
0.1426
6.032e-05
4
4
33.05
0.1426
6.013e-05

ymr031w-a
273
21
2.542
0.05884
0.01026
389
26
2.209
0.05581
0.01652

yor080w (**3)
335
22
2.17
0.04997
0.07169
507
30
1.955
0.0511
0.04517

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
gcn4	72	8	3.672	0.0512	0.1232	92	10	3.592	0.05625	0.04229
pet127	4	4	33.05	0.1426	6.032e-05	4	4	33.05	0.1426	6.013e-05
ymr031w-a	273	21	2.542	0.05884	0.01026	389	26	2.209	0.05581	0.01652
yor080w (**3)	335	22	2.17	0.04997	0.07169	507	30	1.955	0.0511	0.04517