Analysis of genes having pattern STE12 in their upstream region

There is about 243 genes out of 6312 (3.85 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

"dig1, dig2"
437
36
2.14
0.06382
0.001888
580
42
1.881
0.05791
0.007943

HMG2 (tet promoter)
555
36
1.685
0.04443
0.2429
736
49
1.729
0.05505
0.0153

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
"dig1, dig2"	437	36	2.14	0.06382	0.001888	580	42	1.881	0.05791	0.007943
HMG2 (tet promoter)	555	36	1.685	0.04443	0.2429	736	49	1.729	0.05505	0.0153