Analysis of genes having pattern MET31-32 in their upstream region

There is about 58 genes out of 6312 (0.92 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
 Testwise p-value
0.01
2.101e-05
0.05
0.000105

Experiment
 p=0.0250
 p=0.0500

#Signif
 Signif.w. Pattern
 Ratio
 Corr
 p-value
 #Signif
 Signif.w. Pattern
 Ratio
 Corr
 p-value
ckb2
178
5
3.057
0.03388
1.499
257
11
4.658
0.07271
0.001014
gcn4
72
7
10.58
0.09918
0.0001055
92
8
9.463
0.09921
5.358e-05
gln3
73
5
7.454
0.06731
0.01782
110
8
7.915
0.08877
0.0002321
hda1
74
5
7.353
0.06672
0.01914
122
5
4.46
0.04689
0.2535
jnm1
12
0
0
-0.004164
13.38
30
4
14.51
0.08996
0.002802
mrt4
357
13
3.963
0.07001
0.001022
550
13
2.572
0.04697
0.1086
pep12
76
8
11.46
0.1112
1.078e-05
97
8
8.975
0.09604
8.278e-05
rtg1
214
9
4.577
0.06466
0.007297
292
13
4.845
0.08168
9.659e-05
ubr1
61
4
7.136
0.05845
0.07569
107
6
6.102
0.06462
0.01752
vps21
1
1
108.8
0.1307
None
3
2
72.55
0.1503
0.00102
vps8
62
6
10.53
0.0915
0.0005423
95
8
9.164
0.09728
6.981e-05
yel008w
53
4
8.213
0.06399
0.03989
75
5
7.255
0.06614
0.02053
yhl029c
201
8
4.331
0.05831
0.0266
273
8
3.189
0.04497
0.2363
yhr034c
39
0
0
-0.007524
17.51
81
5
6.718
0.06287
0.03092
ymr031w-a
273
11
4.385
0.06945
0.001857
389
13
3.637
0.06524
0.002709
AUR1 (tet promoter)
159
7
4.791
0.05881
0.03071
233
8
3.737
0.05173
0.07858