Analysis of genes having pattern MCM1' in their upstream region

There is about 1874 genes out of 6312 (29.69 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

CMD1 (tet promoter)
376
152
1.362
0.08959
0.02302
523
201
1.294
0.09347
0.03087

FKS1 (tet promoter)
146
70
1.615
0.07983
0.01886
224
98
1.474
0.08232
0.02802

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
CMD1 (tet promoter)	376	152	1.362	0.08959	0.02302	523	201	1.294	0.09347	0.03087
FKS1 (tet promoter)	146	70	1.615	0.07983	0.01886	224	98	1.474	0.08232	0.02802