Hours for Perttu Haimi
Week 3
19.1 2h meeting
Total (week 3): 2h
Week 4
22.1. 2h Meeting with the customer
23.1. 2h Web pages
24.1. 4h Web pages, Meeting: project planning
25.1. 1h Mail to customer, reading material
26.1. 3.5 h Learning cvs, sceleton of req-document
27.1. 3.5h irc-meeting with Osku, reading material
Total (week 4): 16h
Week 5
29.1. 4 h Meeting with the client, reading
30.1. 4 h Writing req-document, reading
31.1. 4 h Meeting, copying articles
1.2. 2 h Adding the source code of the old project to our cvs-tree,
browsing the code.
3.2. 5 h Reading articles
Total (week 5): 19h
Week 6
5.2. 4 h Meeting, reading and copying articles.
6.2. 3 h Reading articles
7.2. 2 h Meeting with Teemu Kivioja
10.2. 2 h Familiriazing with the source code from the previous project.
11.2. 8 h Writing small testprogram for converting mrc to pgm, and splitting
3d model to flat pictures.
Total (week 6): 19h
Week 7
12.2. 4 h meeting, making a picture for req-document, organizing files etc.
13.2. 4 h bugfixing of mrc2pgm, pgm2mrc
14.2. 4 h meeting, reading articles
Total (week 7): 12h
Week 8
19.2. 3 h meeting
21.2. 2 h meeting
24.2. 8 h Programming testgen for generating test pictures
25.2. 8 h Programming testgen for generating test pictures
Total (week 8): 21h
Week 9
26.2. 2 h meeting
28.2. 4 h meeting, emails to customer
Total (week 9): 6h
Week 10
5.3. 2 h meeting
6.3. 7 h writing testing parts for design document,
customer changes to requirements specification.
7.3. 6 h meeting, making test pictures
Total (week 10): 15h
Week 11
12.3. 2 h meeting
13.3. 3 h programming visres
14.3. 2 h meeting
17.3. 10 h experimenting with file loading routines, bf_assert, mem
Total (week 11): 17h
Week 12
19.3. 6 h meeting, testing main loop, checking ribosome.mrc, limit to visres
20.3. 4 h writing file module info to design document
21.3. 10 h meeting, writing and debugging simple gaussian
22.3. 2 h comparison of simple gaussian and gimp gaussian
Total (week 12): 22h
Week 13
26.3. 2 h FTR-meeting
28.3. 2 h Meeting
Total (week 13): 4h
Week 14
2.4. 2 h Meeting
3.4. 6 h Writing file and gaussian module tests to testing document,
making axes-model for angle testing, modifying visres to allow model overlays
on image.
4.4. 2 h Meeting
6.4. 2 h Department day
8.4. 4 h Experimenting with the angle system, making a picture of axes-model
with projections from different angles.
Total (week 14): 16h
Week 15
9.4. 6 h Meeting, studying function optimisation methods from Numerical
recipes in C
11.4 4 h Finding info on fourier transforms.
Total (week 15): 10h
Week 16
Easter holiday
Total (week 16): 0h
Week 17
23.4. 2 h Meeting, changing new testimages from tif to mrc
25.4. 5 h Meeting, learning how to make fourier power spectra with matlab to
evaluate the quality of gaussian filter.
28.4. 3 h Making some 2D fourier images, changing resgen to use new definition
of signal to noise -ratio. File module tests except no. 2 which needs an
mrc file viewer.
29.4. 8 h Writing todo-list for maintanance document.
Total (week 17): 18h
Week 18
30.4. 2 h Meeting
6.5. 10 h testing memory allocation of slave node loop, programming
function to make model cubic, testing the effect of noise, gaussian module
tests for gimp gaussian, simple gaussian and floating point gaussian.
Total (week 18): 12h
Week 19
7.5. 2 h Meeting
8.5. 8 h Final tests: angle test, benchmarking. Writing results to documents.
9.5. 2 h Meeting
11.5. 2 h Demo for the customer
Total (week 19): 14h
Week 20
Total (week 20): h