Overlap tool

A tool for finding approximate suffix/prefix overlaps.

See README in the package for further information.

Return to the SuDS homepage.

Downloads

• May 2011 Fixed a bug in "builder" (was missing the default samplerate value).
• Feb 2011 First public release.

References

• Niko Välimäki, Susana Ladra and Veli Mäkinen: Approximate All-Pairs Suffix/Prefix Overlaps. In Proc. 21st Annual Symposium on Combinatorial Pattern Matching (CPM'10), Springer-Verlag, LNCS 6129, pages 76-87, New York, USA, June 21-23, 2010.